AT5G46390

Description : Peptidase S41 family protein

Gene families : OG0001113 (Archaeplastida) Phylogenetic Tree(s): OG0001113_tree ,
OG_05_0007083 (LandPlants) Phylogenetic Tree(s): OG_05_0007083_tree ,
OG_06_0008182 (SeedPlants) Phylogenetic Tree(s): OG_06_0008182_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G46390
Cluster	HCCA: Cluster_185

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001532.11	No alias	Carboxyl-terminal-processing peptidase 3, chloroplastic...	0.02	Archaeplastida
GSVIVT01001855001	No alias	Protein modification.peptide maturation.plastid.CtpA...	0.04	Archaeplastida
GSVIVT01021388001	No alias	Protein modification.peptide maturation.plastid.CtpA...	0.1	Archaeplastida
LOC_Os01g47450.1	No alias	carboxy-terminal processing peptidase (CtpA)	0.03	Archaeplastida
LOC_Os06g21380.1	No alias	carboxy-terminal processing peptidase (CtpA)	0.03	Archaeplastida
Mp6g10620.1	No alias	carboxy-terminal processing peptidase (CtpA)	0.02	Archaeplastida
Mp7g16940.1	No alias	carboxy-terminal processing peptidase (CtpA)	0.02	Archaeplastida
Pp3c16_16750V3.1	No alias	Peptidase S41 family protein	0.02	Archaeplastida
Pp3c5_6160V3.1	No alias	Peptidase S41 family protein	0.04	Archaeplastida
Pp3c9_5260V3.1	No alias	Peptidase S41 family protein	0.02	Archaeplastida
Solyc12g097030.2.1	No alias	carboxy-terminal processing peptidase (CtpA)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
CC	GO:0009543	chloroplast thylakoid lumen	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0016556	mRNA modification	RCA	Interproscan
CC	GO:0031977	thylakoid lumen	IDA	Interproscan
CC	GO:0031978	plastid thylakoid lumen	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035556	intracellular signal transduction	ISS	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044434	chloroplast part	None	Extended
CC	GO:0044435	plastid part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	Neighborhood
CC	GO:0000229	cytoplasmic chromosome	IEP	Neighborhood
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004326	tetrahydrofolylpolyglutamate synthase activity	IEP	Neighborhood
MF	GO:0004607	phosphatidylcholine-sterol O-acyltransferase activity	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0005982	starch metabolic process	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006090	pyruvate metabolic process	IEP	Neighborhood
BP	GO:0006098	pentose-phosphate shunt	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
BP	GO:0006364	rRNA processing	IEP	Neighborhood
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006644	phospholipid metabolic process	IEP	Neighborhood
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Neighborhood
BP	GO:0006655	phosphatidylglycerol biosynthetic process	IEP	Neighborhood
BP	GO:0006730	one-carbon metabolic process	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006739	NADP metabolic process	IEP	Neighborhood
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Neighborhood
BP	GO:0006766	vitamin metabolic process	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006833	water transport	IEP	Neighborhood
BP	GO:0006873	cellular ion homeostasis	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0008654	phospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009059	macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0009063	cellular amino acid catabolic process	IEP	Neighborhood
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Neighborhood
BP	GO:0009117	nucleotide metabolic process	IEP	Neighborhood
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009249	protein lipoylation	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
BP	GO:0009443	pyridoxal 5'-phosphate salvage	IEP	Neighborhood
CC	GO:0009507	chloroplast	IEP	Neighborhood
CC	GO:0009508	plastid chromosome	IEP	Neighborhood
CC	GO:0009526	plastid envelope	IEP	Neighborhood
CC	GO:0009532	plastid stroma	IEP	Neighborhood
CC	GO:0009534	chloroplast thylakoid	IEP	Neighborhood
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Neighborhood
CC	GO:0009536	plastid	IEP	Neighborhood
CC	GO:0009570	chloroplast stroma	IEP	Neighborhood
BP	GO:0009637	response to blue light	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009657	plastid organization	IEP	Neighborhood
BP	GO:0009658	chloroplast organization	IEP	Neighborhood
BP	GO:0009668	plastid membrane organization	IEP	Neighborhood
BP	GO:0009746	response to hexose	IEP	Neighborhood
BP	GO:0009750	response to fructose	IEP	Neighborhood
BP	GO:0009894	regulation of catabolic process	IEP	Neighborhood
BP	GO:0009895	negative regulation of catabolic process	IEP	Neighborhood
BP	GO:0009902	chloroplast relocation	IEP	Neighborhood
CC	GO:0009941	chloroplast envelope	IEP	Neighborhood
BP	GO:0010027	thylakoid membrane organization	IEP	Neighborhood
BP	GO:0010103	stomatal complex morphogenesis	IEP	Neighborhood
BP	GO:0010155	regulation of proton transport	IEP	Neighborhood
BP	GO:0010206	photosystem II repair	IEP	Neighborhood
BP	GO:0010207	photosystem II assembly	IEP	Neighborhood
BP	GO:0010257	NADH dehydrogenase complex assembly	IEP	Neighborhood
BP	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly	IEP	Neighborhood
CC	GO:0010319	stromule	IEP	Neighborhood
CC	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0016072	rRNA metabolic process	IEP	Neighborhood
BP	GO:0016143	S-glycoside metabolic process	IEP	Neighborhood
BP	GO:0016144	S-glycoside biosynthetic process	IEP	Neighborhood
MF	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
MF	GO:0016987	sigma factor activity	IEP	Neighborhood
MF	GO:0017118	lipoyltransferase activity	IEP	Neighborhood
BP	GO:0018065	protein-cofactor linkage	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
BP	GO:0019252	starch biosynthetic process	IEP	Neighborhood
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Neighborhood
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
BP	GO:0019637	organophosphate metabolic process	IEP	Neighborhood
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Neighborhood
BP	GO:0019693	ribose phosphate metabolic process	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
BP	GO:0019748	secondary metabolic process	IEP	Neighborhood
BP	GO:0019750	chloroplast localization	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0019757	glycosinolate metabolic process	IEP	Neighborhood
BP	GO:0019758	glycosinolate biosynthetic process	IEP	Neighborhood
BP	GO:0019760	glucosinolate metabolic process	IEP	Neighborhood
BP	GO:0019761	glucosinolate biosynthetic process	IEP	Neighborhood
BP	GO:0022607	cellular component assembly	IEP	Neighborhood
BP	GO:0030003	cellular cation homeostasis	IEP	Neighborhood
BP	GO:0030091	protein repair	IEP	Neighborhood
MF	GO:0030385	ferredoxin:thioredoxin reductase activity	IEP	Neighborhood
BP	GO:0031329	regulation of cellular catabolic process	IEP	Neighborhood
BP	GO:0031330	negative regulation of cellular catabolic process	IEP	Neighborhood
CC	GO:0031967	organelle envelope	IEP	Neighborhood
CC	GO:0031975	envelope	IEP	Neighborhood
CC	GO:0031976	plastid thylakoid	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0032879	regulation of localization	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0033819	lipoyl(octanoyl) transferase activity	IEP	Neighborhood
BP	GO:0034284	response to monosaccharide	IEP	Neighborhood
CC	GO:0034357	photosynthetic membrane	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
BP	GO:0034762	regulation of transmembrane transport	IEP	Neighborhood
BP	GO:0034765	regulation of ion transmembrane transport	IEP	Neighborhood
BP	GO:0042044	fluid transport	IEP	Neighborhood
CC	GO:0042651	thylakoid membrane	IEP	Neighborhood
BP	GO:0042816	vitamin B6 metabolic process	IEP	Neighborhood
BP	GO:0042817	pyridoxal metabolic process	IEP	Neighborhood
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	Neighborhood
BP	GO:0042821	pyridoxal biosynthetic process	IEP	Neighborhood
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	Neighborhood
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	Neighborhood
BP	GO:0043085	positive regulation of catalytic activity	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043269	regulation of ion transport	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0043487	regulation of RNA stability	IEP	Neighborhood
BP	GO:0043488	regulation of mRNA stability	IEP	Neighborhood
BP	GO:0043489	RNA stabilization	IEP	Neighborhood
BP	GO:0043933	protein-containing complex subunit organization	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044093	positive regulation of molecular function	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Neighborhood
BP	GO:0046184	aldehyde biosynthetic process	IEP	Neighborhood
BP	GO:0046471	phosphatidylglycerol metabolic process	IEP	Neighborhood
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0046486	glycerolipid metabolic process	IEP	Neighborhood
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Neighborhood
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Neighborhood
BP	GO:0046777	protein autophosphorylation	IEP	Neighborhood
BP	GO:0048255	mRNA stabilization	IEP	Neighborhood
BP	GO:0048878	chemical homeostasis	IEP	Neighborhood
MF	GO:0050236	pyridoxine:NADP 4-dehydrogenase activity	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
BP	GO:0050801	ion homeostasis	IEP	Neighborhood
BP	GO:0051049	regulation of transport	IEP	Neighborhood
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Neighborhood
BP	GO:0051186	cofactor metabolic process	IEP	Neighborhood
BP	GO:0051640	organelle localization	IEP	Neighborhood
BP	GO:0051644	plastid localization	IEP	Neighborhood
BP	GO:0051656	establishment of organelle localization	IEP	Neighborhood
BP	GO:0051667	establishment of plastid localization	IEP	Neighborhood
CC	GO:0055035	plastid thylakoid membrane	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
BP	GO:0055082	cellular chemical homeostasis	IEP	Neighborhood
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Neighborhood
BP	GO:0061013	regulation of mRNA catabolic process	IEP	Neighborhood
BP	GO:0061024	membrane organization	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
BP	GO:0065009	regulation of molecular function	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
MF	GO:0070402	NADPH binding	IEP	Neighborhood
BP	GO:0070838	divalent metal ion transport	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
BP	GO:0072511	divalent inorganic cation transport	IEP	Neighborhood
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0090407	organophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0090626	plant epidermis morphogenesis	IEP	Neighborhood
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Neighborhood
BP	GO:1902369	negative regulation of RNA catabolic process	IEP	Neighborhood
BP	GO:1902373	negative regulation of mRNA catabolic process	IEP	Neighborhood
BP	GO:1903311	regulation of mRNA metabolic process	IEP	Neighborhood
BP	GO:1903312	negative regulation of mRNA metabolic process	IEP	Neighborhood
BP	GO:1904062	regulation of cation transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005151	Tail-specific_protease	307	384

External Links

No external refs found!

AT5G46390

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation