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Description : C3H zinc finger transcription factor
Gene families : OG0001822 (Archaeplastida) Phylogenetic Tree(s): OG0001822_tree ,
OG_05_0002566 (LandPlants) Phylogenetic Tree(s): OG_05_0002566_tree ,
OG_06_0003262 (SeedPlants) Phylogenetic Tree(s): OG_06_0003262_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_324587g0010 | |
| Cluster | HCCA: Cluster_469 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G32360 | No alias | Zinc finger (CCCH-type) family protein | 0.04 | Archaeplastida | |
| Smo413367 | No alias | Zinc finger CCCH domain-containing protein 56 OS=Oryza... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003848 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | IEP | Neighborhood |
| MF | GO:0004555 | alpha,alpha-trehalase activity | IEP | Neighborhood |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0005991 | trehalose metabolic process | IEP | Neighborhood |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006732 | coenzyme metabolic process | IEP | Neighborhood |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009108 | coenzyme biosynthetic process | IEP | Neighborhood |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0015927 | trehalase activity | IEP | Neighborhood |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Neighborhood |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0051188 | cofactor biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000571 | Znf_CCCH | 315 | 340 |
| No external refs found! |