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  5. MA_32560g0010

MA_32560g0010


Description : Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana (sp|q6nq83|pp247_arath : 384.0)


Gene families : OG0001630 (Archaeplastida) Phylogenetic Tree(s): OG0001630_tree ,
OG_05_0001046 (LandPlants) Phylogenetic Tree(s): OG_05_0001046_tree ,
OG_06_0000527 (SeedPlants) Phylogenetic Tree(s): OG_06_0000527_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_32560g0010
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
MA_10433091g0010 No alias Pentatricopeptide repeat-containing protein At1g62930,... 0.04 Archaeplastida
MA_47344g0010 No alias Pentatricopeptide repeat-containing protein At5g39710... 0.05 Archaeplastida
MA_78481g0010 No alias Pentatricopeptide repeat-containing protein At1g63130,... 0.06 Archaeplastida
MA_914400g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.05 Archaeplastida
MA_959553g0010 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 301 350
IPR002885 Pentatricopeptide_repeat 371 419
IPR002885 Pentatricopeptide_repeat 476 525
IPR002885 Pentatricopeptide_repeat 546 595
IPR002885 Pentatricopeptide_repeat 231 280
IPR002885 Pentatricopeptide_repeat 161 210
IPR002885 Pentatricopeptide_repeat 64 84
IPR002885 Pentatricopeptide_repeat 94 123
IPR002885 Pentatricopeptide_repeat 125 155
IPR002885 Pentatricopeptide_repeat 437 467
No external refs found!