MA_33097g0010

Description : Nuclear-pore anchor OS=Arabidopsis thaliana (sp|a4gsn8|nua_arath : 123.0)

Gene families : OG0003427 (Archaeplastida) Phylogenetic Tree(s): OG0003427_tree ,
OG_05_0004010 (LandPlants) Phylogenetic Tree(s): OG_05_0004010_tree ,
OG_06_0005364 (SeedPlants) Phylogenetic Tree(s): OG_06_0005364_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_33097g0010
Cluster	HCCA: Cluster_491

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00124730	evm_27.TU.AmTr_v1...	Protein translocation.nucleus.nucleocytoplasmic...	0.05	Archaeplastida
AT1G79280	NUA, AtTPR	nuclear pore anchor	0.07	Archaeplastida
Cpa\|evm.model.tig00000404.46	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.03	Archaeplastida
GSVIVT01036698001	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.17	Archaeplastida
Gb_36757	No alias	NUA nucleoporin of nuclear pore complex	0.07	Archaeplastida
LOC_Os02g50790.2	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os02g50799.1	No alias	NUA nucleoporin of nuclear pore complex	0.07	Archaeplastida
MA_125713g0010	No alias	no hits & (original description: none)	0.13	Archaeplastida
Mp2g14600.1	No alias	NUA nucleoporin of nuclear pore complex	0.09	Archaeplastida
Pp3c8_8020V3.1	No alias	nuclear pore anchor	0.1	Archaeplastida
Smo444132	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.05	Archaeplastida
Solyc06g053570.2.1	No alias	NUA nucleoporin of nuclear pore complex	0.1	Archaeplastida
Zm00001e023916_P004	No alias	NUA nucleoporin of nuclear pore complex	0.1	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006606	protein import into nucleus	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0017038	protein import	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Neighborhood
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Neighborhood
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004527	exonuclease activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
MF	GO:0008408	3'-5' exonuclease activity	IEP	Neighborhood
MF	GO:0008536	Ran GTPase binding	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017069	snRNA binding	IEP	Neighborhood
MF	GO:0017070	U6 snRNA binding	IEP	Neighborhood
MF	GO:0030623	U5 snRNA binding	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR012929	TPR/MLP1	129	214

External Links

No external refs found!