AT5G46830 (NIG1, ATNIG1)


Aliases : NIG1, ATNIG1

Description : NACL-inducible gene 1


Gene families : OG0000688 (Archaeplastida) Phylogenetic Tree(s): OG0000688_tree ,
OG_05_0000488 (LandPlants) Phylogenetic Tree(s): OG_05_0000488_tree ,
OG_06_0001395 (SeedPlants) Phylogenetic Tree(s): OG_06_0001395_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G46830
Cluster HCCA: Cluster_94


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity TAS Interproscan
MF GO:0005509 calcium ion binding IDA Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0042538 hyperosmotic salinity response IMP Interproscan
Type GO Term Name Evidence Source
BP GO:0006863 purine nucleobase transport IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0009850 auxin metabolic process IEP Neighborhood
BP GO:0010015 root morphogenesis IEP Neighborhood
BP GO:0010101 post-embryonic root morphogenesis IEP Neighborhood
BP GO:0010102 lateral root morphogenesis IEP Neighborhood
BP GO:0010249 auxin conjugate metabolic process IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016556 mRNA modification IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 35 225
IPR011598 bHLH_dom 343 388
No external refs found!