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  5. MA_335848g0010

MA_335848g0010


Description : pri-miRNA recruitment factor (STV1). component RPL24 of LSU proteome component


Gene families : OG0001838 (Archaeplastida) Phylogenetic Tree(s): OG0001838_tree ,
OG_05_0001764 (LandPlants) Phylogenetic Tree(s): OG_05_0001764_tree ,
OG_06_0078915 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_335848g0010
Cluster HCCA: Cluster_452

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g59990.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042255 ribosome assembly IEP Neighborhood
BP GO:0042256 mature ribosome assembly IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
MF GO:0043022 ribosome binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 6 47
No external refs found!