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  5. MA_3471g0010

MA_3471g0010


Description : RNA editing factor (MEF19)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_3471g0010
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT3G12770 MEF22 mitochondrial editing factor 22 0.03 Archaeplastida
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.04 Archaeplastida
GSVIVT01007974001 No alias Pentatricopeptide repeat-containing protein At5g61400... 0.03 Archaeplastida
GSVIVT01010647001 No alias Pentatricopeptide repeat-containing protein At2g22410,... 0.04 Archaeplastida
GSVIVT01012174001 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.03 Archaeplastida
GSVIVT01016860001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
GSVIVT01016874001 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.04 Archaeplastida
GSVIVT01017989001 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
GSVIVT01020929001 No alias Pentatricopeptide repeat-containing protein At1g04840... 0.03 Archaeplastida
GSVIVT01024588001 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.04 Archaeplastida
GSVIVT01030054001 No alias Pentatricopeptide repeat-containing protein At5g48910... 0.03 Archaeplastida
GSVIVT01031265001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.04 Archaeplastida
GSVIVT01033863001 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
GSVIVT01036757001 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 Archaeplastida
Gb_00194 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_01226 No alias RNA editing factor (OTP82) 0.07 Archaeplastida
Gb_01648 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_02060 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_02998 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 Archaeplastida
Gb_03136 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 Archaeplastida
Gb_03137 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_03354 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_03474 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_03570 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_03597 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
Gb_03691 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.04 Archaeplastida
Gb_03693 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.1 Archaeplastida
Gb_04091 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.08 Archaeplastida
Gb_04417 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.05 Archaeplastida
Gb_04460 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_04533 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_04616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_04844 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_05123 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 Archaeplastida
Gb_05127 No alias Pentatricopeptide repeat-containing protein At3g26540... 0.06 Archaeplastida
Gb_05259 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.05 Archaeplastida
Gb_05883 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
Gb_05939 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_07727 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_08036 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_08118 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.04 Archaeplastida
Gb_08569 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_08619 No alias RNA editing factor (MEF19) 0.03 Archaeplastida
Gb_08744 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_08772 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Gb_08862 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 Archaeplastida
Gb_09146 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 Archaeplastida
Gb_09361 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_09382 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_09702 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_10133 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_10151 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 Archaeplastida
Gb_10158 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_10615 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_10726 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Gb_10985 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 Archaeplastida
Gb_11222 No alias Putative pentatricopeptide repeat-containing protein... 0.11 Archaeplastida
Gb_11523 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
Gb_11581 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_11667 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 Archaeplastida
Gb_12240 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
Gb_12555 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_13227 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_13369 No alias RNA editing factor (MEF12) 0.07 Archaeplastida
Gb_13599 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_14403 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_14445 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_15129 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.05 Archaeplastida
Gb_15235 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_15507 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
Gb_15639 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_16070 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_16366 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
Gb_16515 No alias RNA editing factor (MEF11) 0.04 Archaeplastida
Gb_16828 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
Gb_16955 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_17095 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_17294 No alias RNA editing factor (MEF3) 0.04 Archaeplastida
Gb_17295 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
Gb_17962 No alias RNA editing factor (SEL1/PDM1) 0.03 Archaeplastida
Gb_18600 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.08 Archaeplastida
Gb_18914 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.07 Archaeplastida
Gb_19828 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_20266 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_20503 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_20749 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_20774 No alias RNA editing factor (MEF19). RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_20837 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 Archaeplastida
Gb_21047 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida
Gb_21237 No alias Putative pentatricopeptide repeat-containing protein... 0.09 Archaeplastida
Gb_22288 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
Gb_22658 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.06 Archaeplastida
Gb_23018 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_23083 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_23084 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_23267 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_23605 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 Archaeplastida
Gb_23924 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_24030 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_24114 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 Archaeplastida
Gb_24674 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_24755 No alias RNA editing factor (MEF19). RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_25271 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_25283 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_25359 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_25581 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida
Gb_25604 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_25869 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.04 Archaeplastida
Gb_26501 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_26689 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_26696 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_26723 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_27176 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.07 Archaeplastida
Gb_27468 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_27797 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_27833 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_28030 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.06 Archaeplastida
Gb_28279 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_28762 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_28787 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.05 Archaeplastida
Gb_29868 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_29877 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_29879 No alias RNA editing factor (MEF19). RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_29990 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.07 Archaeplastida
Gb_30146 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_30661 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_30918 No alias RNA editing factor (OTP82) 0.08 Archaeplastida
Gb_30993 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_31162 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.1 Archaeplastida
Gb_31546 No alias RNA editing factor (MEF3) 0.04 Archaeplastida
Gb_32051 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_32447 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.03 Archaeplastida
Gb_32448 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_33111 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_33328 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_33575 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_33718 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_33726 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_34298 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_34963 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_35395 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_35407 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_35599 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.08 Archaeplastida
Gb_35645 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.04 Archaeplastida
Gb_36172 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.05 Archaeplastida
Gb_36177 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.04 Archaeplastida
Gb_36365 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_36614 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_36636 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_38441 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
Gb_38504 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_38750 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_38751 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_39298 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_40434 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 Archaeplastida
Gb_40436 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_40437 No alias RNA editing factor (MEF3) 0.1 Archaeplastida
Gb_40472 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_41233 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_41317 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_41804 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
LOC_Os03g63260.3 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
LOC_Os08g25280.1 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 Archaeplastida
MA_103698g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
MA_140591g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.07 Archaeplastida
MA_19715g0020 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.07 Archaeplastida
MA_470025g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.05 Archaeplastida
MA_472579g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 Archaeplastida
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
MA_60579g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
MA_61422g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
MA_73895g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
MA_81105g0010 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
MA_8319g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.04 Archaeplastida
MA_89214g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
MA_9384g0020 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.04 Archaeplastida
MA_953793g0020 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
Smo137234 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 Archaeplastida
Smo42377 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.03 Archaeplastida
Smo428483 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Smo70138 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Smo77426 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Smo79457 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Smo82058 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
Smo92471 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Smo94945 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
Zm00001e000335_P001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
Zm00001e002234_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003284_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Zm00001e003562_P001 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.08 Archaeplastida
Zm00001e005246_P001 No alias Pentatricopeptide repeat-containing protein At2g41080... 0.03 Archaeplastida
Zm00001e007597_P001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 Archaeplastida
Zm00001e010837_P001 No alias Pentatricopeptide repeat-containing protein At5g48910... 0.03 Archaeplastida
Zm00001e011748_P001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.05 Archaeplastida
Zm00001e013116_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e013713_P001 No alias Pentatricopeptide repeat-containing protein At4g20770... 0.03 Archaeplastida
Zm00001e015727_P001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.02 Archaeplastida
Zm00001e016923_P001 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.02 Archaeplastida
Zm00001e018346_P001 No alias Pentatricopeptide repeat-containing protein At3g29230... 0.04 Archaeplastida
Zm00001e018597_P001 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.04 Archaeplastida
Zm00001e020567_P001 No alias RNA editing factor (MEF7) 0.04 Archaeplastida
Zm00001e022858_P001 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Zm00001e030831_P001 No alias Pentatricopeptide repeat-containing protein At3g20730... 0.03 Archaeplastida
Zm00001e030887_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Zm00001e031396_P001 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 Archaeplastida
Zm00001e036302_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e037600_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Zm00001e041893_P001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 702 725
IPR002885 Pentatricopeptide_repeat 588 623
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 425 472
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 223 271
IPR002885 Pentatricopeptide_repeat 324 371
IPR002885 Pentatricopeptide_repeat 526 573
IPR002885 Pentatricopeptide_repeat 626 674
IPR032867 DYW_dom 800 863
No external refs found!