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  5. AT5G47250

AT5G47250


Description : LRR and NB-ARC domains-containing disease resistance protein


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G47250
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00126150 evm_27.TU.AmTr_v1... Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00099p00016360 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G12220 RPS5 Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT1G61180 No alias LRR and NB-ARC domains-containing disease resistance protein 0.05 Archaeplastida
AT1G61190 No alias LRR and NB-ARC domains-containing disease resistance protein 0.14 Archaeplastida
AT1G61300 No alias LRR and NB-ARC domains-containing disease resistance protein 0.07 Archaeplastida
AT1G63350 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT4G26090 RPS2 NB-ARC domain-containing disease resistance protein 0.06 Archaeplastida
AT5G05400 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 Archaeplastida
AT5G63020 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
GSVIVT01017020001 No alias Probable disease resistance protein At5g63020... 0.04 Archaeplastida
GSVIVT01017227001 No alias No description available 0.04 Archaeplastida
GSVIVT01038404001 No alias Probable disease resistance protein At1g12290... 0.06 Archaeplastida
Gb_18201 No alias Probable disease resistance protein At1g61180... 0.03 Archaeplastida
Gb_37091 No alias Probable disease resistance protein At1g15890... 0.04 Archaeplastida
LOC_Os11g36410.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_31961g0010 No alias Probable disease resistance protein At5g63020... 0.05 Archaeplastida
MA_322817g0010 No alias Probable disease resistance protein At1g61190... 0.03 Archaeplastida
MA_690530g0010 No alias Probable disease resistance protein At5g43730... 0.03 Archaeplastida
Solyc02g037540.3.1 No alias Probable disease resistance protein At4g27220... 0.03 Archaeplastida
Solyc08g013970.3.1 No alias Probable disease resistance protein At4g27220... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0006952 defense response ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004407 histone deacetylase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004563 beta-N-acetylhexosaminidase activity IEP Neighborhood
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0009734 auxin-activated signaling pathway IEP Neighborhood
MF GO:0015929 hexosaminidase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0019213 deacetylase activity IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
MF GO:0033558 protein deacetylase activity IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 535 594
IPR002182 NB-ARC 161 398
No external refs found!