MA_34887g0010


Description : Enzyme classification.EC_6 ligases.EC_6.1 ligase forming carbon-oxygen bond(50.6.1 : 375.5) & Threonine--tRNA ligase, mitochondrial 1 OS=Arabidopsis thaliana (sp|o04630|sytm1_arath : 367.0)


Gene families : OG0001503 (Archaeplastida) Phylogenetic Tree(s): OG0001503_tree ,
OG_05_0003982 (LandPlants) Phylogenetic Tree(s): OG_05_0003982_tree ,
OG_06_0004552 (SeedPlants) Phylogenetic Tree(s): OG_06_0004552_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_34887g0010
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00165940 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
LOC_Os08g19850.1 No alias threonine-tRNA ligase 0.02 Archaeplastida
Mp1g23020.1 No alias threonine-tRNA ligase 0.02 Archaeplastida
Pp3c20_19020V3.1 No alias Threonyl-tRNA synthetase 0.04 Archaeplastida
Pp3c2_11130V3.1 No alias threonyl-tRNA synthetase, putative / threonine--tRNA... 0.02 Archaeplastida
Smo130418 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
Zm00001e012332_P002 No alias threonine-tRNA ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
InterPro domains Description Start Stop
IPR012947 tRNA_SAD 68 117
No external refs found!