- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : RGPR-related
Gene families : OG0000907 (Archaeplastida) Phylogenetic Tree(s): OG0000907_tree ,
OG_05_0000738 (LandPlants) Phylogenetic Tree(s): OG_05_0000738_tree ,
OG_06_0003044 (SeedPlants) Phylogenetic Tree(s): OG_06_0003044_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G47490 | |
| Cluster | HCCA: Cluster_186 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os06g01650.1 | No alias | Sar1-GTPase-regulating protein (Sec16) | 0.02 | Archaeplastida | |
| Pp3c19_909V3.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Solyc08g007340.3.1 | No alias | Sar1-GTPase-regulating protein (Sec16) | 0.03 | Archaeplastida | |
| Solyc08g007360.3.1 | No alias | Sar1-GTPase-regulating protein (Sec16) | 0.03 | Archaeplastida | |
| Zm00001e029805_P005 | No alias | Sar1-GTPase-regulating protein (Sec16) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
| CC | GO:0000139 | Golgi membrane | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003774 | motor activity | IEP | Neighborhood |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| CC | GO:0005768 | endosome | IEP | Neighborhood |
| CC | GO:0005794 | Golgi apparatus | IEP | Neighborhood |
| CC | GO:0005802 | trans-Golgi network | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006409 | tRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006491 | N-glycan processing | IEP | Neighborhood |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Neighborhood |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
| BP | GO:0009100 | glycoprotein metabolic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0010289 | homogalacturonan biosynthetic process | IEP | Neighborhood |
| BP | GO:0010393 | galacturonan metabolic process | IEP | Neighborhood |
| BP | GO:0010394 | homogalacturonan metabolic process | IEP | Neighborhood |
| MF | GO:0015923 | mannosidase activity | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| CC | GO:0016459 | myosin complex | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
| MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
| BP | GO:0017144 | drug metabolic process | IEP | Neighborhood |
| BP | GO:0030029 | actin filament-based process | IEP | Neighborhood |
| BP | GO:0030048 | actin filament-based movement | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
| CC | GO:0030126 | COPI vesicle coat | IEP | Neighborhood |
| CC | GO:0031410 | cytoplasmic vesicle | IEP | Neighborhood |
| CC | GO:0031982 | vesicle | IEP | Neighborhood |
| CC | GO:0031984 | organelle subcompartment | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044431 | Golgi apparatus part | IEP | Neighborhood |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| BP | GO:0045488 | pectin metabolic process | IEP | Neighborhood |
| BP | GO:0045489 | pectin biosynthetic process | IEP | Neighborhood |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Neighborhood |
| MF | GO:0047262 | polygalacturonate 4-alpha-galacturonosyltransferase activity | IEP | Neighborhood |
| BP | GO:0048868 | pollen tube development | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| BP | GO:0051031 | tRNA transport | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| BP | GO:0051645 | Golgi localization | IEP | Neighborhood |
| BP | GO:0051646 | mitochondrion localization | IEP | Neighborhood |
| BP | GO:0052325 | cell wall pectin biosynthetic process | IEP | Neighborhood |
| BP | GO:0052546 | cell wall pectin metabolic process | IEP | Neighborhood |
| BP | GO:0060151 | peroxisome localization | IEP | Neighborhood |
| BP | GO:0097064 | ncRNA export from nucleus | IEP | Neighborhood |
| CC | GO:0097708 | intracellular vesicle | IEP | Neighborhood |
| CC | GO:0098791 | Golgi subcompartment | IEP | Neighborhood |
| No external refs found! |