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  5. MA_354754g0010

MA_354754g0010


Description : no hits & (original description: none)


Gene families : OG0000487 (Archaeplastida) Phylogenetic Tree(s): OG0000487_tree ,
OG_05_0000263 (LandPlants) Phylogenetic Tree(s): OG_05_0000263_tree ,
OG_06_0000118 (SeedPlants) Phylogenetic Tree(s): OG_06_0000118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_354754g0010
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
MA_100550g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_128027g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_15450g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_172120g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_173420g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_186611g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_18908g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_226873g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_3179g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_34920g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_47846g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_54874g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_767g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_87029g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_89022g0010 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!