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  5. MA_35592g0020

MA_35592g0020


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_35592g0020

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00101270 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.01 Archaeplastida
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.03 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.01 Archaeplastida
AT3G29030 EXP5, ATHEXP... expansin A5 0.02 Archaeplastida
Gb_07436 No alias Expansin-A4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_13985 No alias alpha-class expansin 0.04 Archaeplastida
Gb_16008 No alias alpha-class expansin 0.03 Archaeplastida
Gb_28036 No alias Expansin-A29 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os03g06040.1 No alias alpha-class expansin 0.11 Archaeplastida
MA_10433559g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.03 Archaeplastida
MA_6644365g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Pp3c14_18450V3.1 No alias expansin A14 0.01 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c21_1940V3.1 No alias expansin A9 0.02 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.01 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.01 Archaeplastida
Zm00001e040578_P001 No alias alpha-class expansin 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 68 153
IPR007117 Expansin_CBD 164 241
No external refs found!