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  5. MA_35889g0010

MA_35889g0010


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 543.0)


Gene families : OG0006958 (Archaeplastida) Phylogenetic Tree(s): OG0006958_tree ,
OG_05_0093213 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0074152 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_35889g0010
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Gb_23085 No alias RNA editing factor (MEF19) 0.06 Archaeplastida
Gb_33311 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.1 Archaeplastida
MA_450924g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Smo114085 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 122 170
IPR002885 Pentatricopeptide_repeat 223 272
IPR002885 Pentatricopeptide_repeat 324 368
IPR002885 Pentatricopeptide_repeat 428 458
IPR002885 Pentatricopeptide_repeat 468 491
IPR002885 Pentatricopeptide_repeat 400 426
IPR032867 DYW_dom 600 681
No external refs found!