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  5. MA_373963g0010

MA_373963g0010


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000216 (SeedPlants) Phylogenetic Tree(s): OG_06_0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_373963g0010
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267830 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase 0.04 Archaeplastida
AMTR_s00044p00112360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT1G49210 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G35910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G11110 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT3G20395 No alias RING/U-box superfamily protein 0.08 Archaeplastida
AT3G61460 BRH1 brassinosteroid-responsive RING-H2 0.03 Archaeplastida
AT3G62690 ATL5 AtL5 0.03 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.04 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT5G01880 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT5G41400 No alias RING/U-box superfamily protein 0.07 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01022306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01030125001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_15297 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_35824 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_41385 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g46340.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g49710.1 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.04 Archaeplastida
LOC_Os02g52210.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g45580.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os07g06560.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
LOC_Os09g30160.1 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_15246g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_181940g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_2159g0010 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_402876g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_51630g0010 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
MA_85088g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_895676g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
Mp6g19130.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Pp3c18_5860V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Smo101273 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo109459 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
Solyc01g081040.4.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc02g083400.3.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc04g081890.1.1 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.02 Archaeplastida
Solyc08g008080.1.1 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.03 Archaeplastida
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g006230.3.1 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g094385.1.1 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e002233_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e002430_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e032838_P001 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
Zm00001e036085_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038229_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 128
No external refs found!