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  5. MA_37578g0010

MA_37578g0010


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001331 (LandPlants) Phylogenetic Tree(s): OG_05_0001331_tree ,
OG_06_0000478 (SeedPlants) Phylogenetic Tree(s): OG_06_0000478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_37578g0010
Cluster HCCA: Cluster_901

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00240920 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
AMTR_s00075p00134690 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G46160 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT4G17245 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.02 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.01 Archaeplastida
GSVIVT01007793001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012020001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01019530001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_04643 No alias RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_04644 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Gb_04645 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Gb_20461 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_26582 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_32878 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo101273 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo8844 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Solyc10g081790.1.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 63 106
No external refs found!