AT5G48640

Description : Cyclin family protein

Gene families : OG0005454 (Archaeplastida) Phylogenetic Tree(s): OG0005454_tree ,
OG_05_0004808 (LandPlants) Phylogenetic Tree(s): OG_05_0004808_tree ,
OG_06_0006911 (SeedPlants) Phylogenetic Tree(s): OG_06_0006911_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G48640
Cluster	HCCA: Cluster_230

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	None	Extended
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010440	stomatal lineage progression	RCA	Interproscan
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051726	regulation of cell cycle	ISS	Interproscan
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097472	cyclin-dependent protein kinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000210	NAD+ diphosphatase activity	IEP	Neighborhood
BP	GO:0000902	cell morphogenesis	IEP	Neighborhood
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Neighborhood
BP	GO:0002215	defense response to nematode	IEP	Neighborhood
BP	GO:0003002	regionalization	IEP	Neighborhood
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004301	epoxide hydrolase activity	IEP	Neighborhood
MF	GO:0004551	nucleotide diphosphatase activity	IEP	Neighborhood
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0004679	AMP-activated protein kinase activity	IEP	Neighborhood
MF	GO:0004723	calcium-dependent protein serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0005102	signaling receptor binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0006195	purine nucleotide catabolic process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0007389	pattern specification process	IEP	Neighborhood
MF	GO:0008893	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	IEP	Neighborhood
BP	GO:0009154	purine ribonucleotide catabolic process	IEP	Neighborhood
BP	GO:0009261	ribonucleotide catabolic process	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
BP	GO:0009411	response to UV	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
CC	GO:0009503	thylakoid light-harvesting complex	IEP	Neighborhood
CC	GO:0009517	PSII associated light-harvesting complex II	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
BP	GO:0009791	post-embryonic development	IEP	Neighborhood
BP	GO:0009826	unidimensional cell growth	IEP	Neighborhood
BP	GO:0009827	plant-type cell wall modification	IEP	Neighborhood
BP	GO:0009838	abscission	IEP	Neighborhood
BP	GO:0009860	pollen tube growth	IEP	Neighborhood
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009908	flower development	IEP	Neighborhood
BP	GO:0009909	regulation of flower development	IEP	Neighborhood
BP	GO:0009932	cell tip growth	IEP	Neighborhood
BP	GO:0009958	positive gravitropism	IEP	Neighborhood
BP	GO:0010014	meristem initiation	IEP	Neighborhood
BP	GO:0010048	vernalization response	IEP	Neighborhood
BP	GO:0010093	specification of floral organ identity	IEP	Neighborhood
BP	GO:0010117	photoprotection	IEP	Neighborhood
BP	GO:0010152	pollen maturation	IEP	Neighborhood
BP	GO:0010227	floral organ abscission	IEP	Neighborhood
BP	GO:0010315	auxin efflux	IEP	Neighborhood
MF	GO:0010328	auxin influx transmembrane transporter activity	IEP	Neighborhood
MF	GO:0010329	auxin efflux transmembrane transporter activity	IEP	Neighborhood
BP	GO:0010540	basipetal auxin transport	IEP	Neighborhood
BP	GO:0010541	acropetal auxin transport	IEP	Neighborhood
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	Neighborhood
BP	GO:0010942	positive regulation of cell death	IEP	Neighborhood
MF	GO:0010945	CoA pyrophosphatase activity	IEP	Neighborhood
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015936	coenzyme A metabolic process	IEP	Neighborhood
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
BP	GO:0016122	xanthophyll metabolic process	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016597	amino acid binding	IEP	Neighborhood
MF	GO:0016794	diphosphoric monoester hydrolase activity	IEP	Neighborhood
MF	GO:0016801	hydrolase activity, acting on ether bonds	IEP	Neighborhood
MF	GO:0016803	ether hydrolase activity	IEP	Neighborhood
BP	GO:0017148	negative regulation of translation	IEP	Neighborhood
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	Neighborhood
BP	GO:0019953	sexual reproduction	IEP	Neighborhood
BP	GO:0021700	developmental maturation	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
CC	GO:0030076	light-harvesting complex	IEP	Neighborhood
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Neighborhood
CC	GO:0031371	ubiquitin conjugating enzyme complex	IEP	Neighborhood
CC	GO:0031372	UBC13-MMS2 complex	IEP	Neighborhood
BP	GO:0032055	negative regulation of translation in response to stress	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032928	regulation of superoxide anion generation	IEP	Neighborhood
BP	GO:0032989	cellular component morphogenesis	IEP	Neighborhood
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	Neighborhood
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0033869	nucleoside bisphosphate catabolic process	IEP	Neighborhood
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0034031	ribonucleoside bisphosphate catabolic process	IEP	Neighborhood
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0034034	purine nucleoside bisphosphate catabolic process	IEP	Neighborhood
BP	GO:0034052	positive regulation of plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0034249	negative regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0043068	positive regulation of programmed cell death	IEP	Neighborhood
BP	GO:0043455	regulation of secondary metabolic process	IEP	Neighborhood
BP	GO:0043473	pigmentation	IEP	Neighborhood
BP	GO:0043476	pigment accumulation	IEP	Neighborhood
BP	GO:0043478	pigment accumulation in response to UV light	IEP	Neighborhood
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	Neighborhood
BP	GO:0043480	pigment accumulation in tissues	IEP	Neighborhood
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	Neighborhood
BP	GO:0043555	regulation of translation in response to stress	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044273	sulfur compound catabolic process	IEP	Neighborhood
BP	GO:0044703	multi-organism reproductive process	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0045595	regulation of cell differentiation	IEP	Neighborhood
BP	GO:0045596	negative regulation of cell differentiation	IEP	Neighborhood
BP	GO:0046777	protein autophosphorylation	IEP	Neighborhood
BP	GO:0048367	shoot system development	IEP	Neighborhood
BP	GO:0048437	floral organ development	IEP	Neighborhood
BP	GO:0048440	carpel development	IEP	Neighborhood
BP	GO:0048441	petal development	IEP	Neighborhood
BP	GO:0048443	stamen development	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
BP	GO:0048497	maintenance of floral organ identity	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048523	negative regulation of cellular process	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048588	developmental cell growth	IEP	Neighborhood
BP	GO:0048589	developmental growth	IEP	Neighborhood
BP	GO:0048608	reproductive structure development	IEP	Neighborhood
BP	GO:0048731	system development	IEP	Neighborhood
BP	GO:0048827	phyllome development	IEP	Neighborhood
BP	GO:0048831	regulation of shoot system development	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0050793	regulation of developmental process	IEP	Neighborhood
BP	GO:0051239	regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071695	anatomical structure maturation	IEP	Neighborhood
BP	GO:0072523	purine-containing compound catabolic process	IEP	Neighborhood
BP	GO:0080149	sucrose induced translational repression	IEP	Neighborhood
MF	GO:0080161	auxin transmembrane transporter activity	IEP	Neighborhood
BP	GO:0090322	regulation of superoxide metabolic process	IEP	Neighborhood
BP	GO:0090567	reproductive shoot system development	IEP	Neighborhood
BP	GO:0090700	maintenance of plant organ identity	IEP	Neighborhood
BP	GO:0090701	specification of plant organ identity	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1900407	regulation of cellular response to oxidative stress	IEP	Neighborhood
BP	GO:1901031	regulation of response to reactive oxygen species	IEP	Neighborhood
BP	GO:1902882	regulation of response to oxidative stress	IEP	Neighborhood
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:2000026	regulation of multicellular organismal development	IEP	Neighborhood
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2000121	regulation of removal of superoxide radicals	IEP	Neighborhood
BP	GO:2000241	regulation of reproductive process	IEP	Neighborhood
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	Neighborhood
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:2001293	malonyl-CoA metabolic process	IEP	Neighborhood
BP	GO:2001294	malonyl-CoA catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006671	Cyclin_N	45	142

External Links

No external refs found!

AT5G48640

Expression Profile

Co-expression Networks

Functional Annotation