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  5. AT5G48650

AT5G48650


Description : Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain


Gene families : OG0000605 (Archaeplastida) Phylogenetic Tree(s): OG0000605_tree ,
OG_05_0047873 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0042715 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48650
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000829.14 No alias No description available 0.01 Archaeplastida
MA_139137g0010 No alias mRNA endoribonuclease (G3BP) 0.02 Archaeplastida
Zm00001e035497_P008 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006913 nucleocytoplasmic transport ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004407 histone deacetylase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005945 6-phosphofructokinase complex IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
MF GO:0019213 deacetylase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0030856 regulation of epithelial cell differentiation IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0033558 protein deacetylase activity IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045604 regulation of epidermal cell differentiation IEP Neighborhood
BP GO:0045682 regulation of epidermis development IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
InterPro domains Description Start Stop
IPR002075 NTF2 16 133
IPR000504 RRM_dom 321 379
No external refs found!