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Description : RING-H2-class E3 ligase
Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000216 (SeedPlants) Phylogenetic Tree(s): OG_06_0000216_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_38494g0010 | |
| Cluster | HCCA: Cluster_419 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00271850 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
| AMTR_s00025p00229930 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| AMTR_s00044p00112360 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| AMTR_s00049p00223430 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
| AT2G18670 | No alias | RING/U-box superfamily protein | 0.04 | Archaeplastida | |
| AT3G43430 | No alias | RING/U-box superfamily protein | 0.04 | Archaeplastida | |
| AT4G00305 | No alias | RING/U-box superfamily protein | 0.04 | Archaeplastida | |
| AT4G11370 | RHA1A | RING-H2 finger A1A | 0.02 | Archaeplastida | |
| AT4G17245 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| AT5G10380 | ATRING1, RING1 | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01026703001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.09 | Archaeplastida | |
| GSVIVT01037142001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
| GSVIVT01038717001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| Gb_20666 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| LOC_Os01g11520.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| LOC_Os02g45390.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| LOC_Os04g49550.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| LOC_Os05g15170.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| LOC_Os06g34560.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| LOC_Os12g42530.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_201391g0010 | No alias | Probable E3 ubiquitin-protein ligase RHA1A... | 0.03 | Archaeplastida | |
| MA_43543g0010 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| MA_55185g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| MA_61738g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_92400g0010 | No alias | RING-H2-class E3 ligase | 0.06 | Archaeplastida | |
| Pp3c19_14050V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| Pp3c23_1651V3.1 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| Pp3c24_7770V3.1 | No alias | hypoxia-responsive family protein / zinc finger... | 0.02 | Archaeplastida | |
| Smo59303 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| Solyc03g033330.3.1 | No alias | NEP1-interacting protein 1 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| Solyc03g114090.1.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Solyc06g053640.1.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Solyc06g150136.1.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e007103_P001 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| Zm00001e008020_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e010029_P001 | No alias | ubiquitin protein ligase (XERICO) | 0.04 | Archaeplastida | |
| Zm00001e017509_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e022781_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e041409_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003883 | CTP synthase activity | IEP | Neighborhood |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Neighborhood |
| MF | GO:0004612 | phosphoenolpyruvate carboxykinase (ATP) activity | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006006 | glucose metabolic process | IEP | Neighborhood |
| BP | GO:0006020 | inositol metabolic process | IEP | Neighborhood |
| BP | GO:0006066 | alcohol metabolic process | IEP | Neighborhood |
| BP | GO:0006094 | gluconeogenesis | IEP | Neighborhood |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Neighborhood |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Neighborhood |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Neighborhood |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Neighborhood |
| BP | GO:0019310 | inositol catabolic process | IEP | Neighborhood |
| BP | GO:0019318 | hexose metabolic process | IEP | Neighborhood |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Neighborhood |
| BP | GO:0019751 | polyol metabolic process | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0044275 | cellular carbohydrate catabolic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0044282 | small molecule catabolic process | IEP | Neighborhood |
| BP | GO:0046164 | alcohol catabolic process | IEP | Neighborhood |
| BP | GO:0046174 | polyol catabolic process | IEP | Neighborhood |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0050113 | inositol oxygenase activity | IEP | Neighborhood |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Neighborhood |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 103 | 146 |
| No external refs found! |