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  5. MA_38565g0010

MA_38565g0010


Description : histone (H2B)


Gene families : OG0000186 (Archaeplastida) Phylogenetic Tree(s): OG0000186_tree ,
OG_05_0000249 (LandPlants) Phylogenetic Tree(s): OG_05_0000249_tree ,
OG_06_0000187 (SeedPlants) Phylogenetic Tree(s): OG_06_0000187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_38565g0010
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00085300 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
AMTR_s00012p00085960 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
AT1G07790 HTB1 Histone superfamily protein 0.03 Archaeplastida
AT3G45980 HTB9, H2B Histone superfamily protein 0.03 Archaeplastida
AT3G46030 HTB11 Histone superfamily protein 0.05 Archaeplastida
AT5G22880 HTB2, H2B histone B2 0.03 Archaeplastida
AT5G59910 HTB4 Histone superfamily protein 0.02 Archaeplastida
Cre06.g264800 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre06.g264900 No alias Chromatin organisation.histones.H2B-type histone 0.05 Archaeplastida
Cre06.g265400 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre06.g266750 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre06.g271376 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre06.g273850 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre06.g274250 No alias Chromatin organisation.histones.H2B-type histone 0.04 Archaeplastida
Cre06.g274750 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre06.g275800 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre06.g276550 No alias Chromatin organisation.histones.H2B-type histone 0.05 Archaeplastida
Cre06.g276900 No alias Chromatin organisation.histones.H2B-type histone 0.04 Archaeplastida
Cre12.g504550 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre12.g504700 No alias Chromatin organisation.histones.H2B-type histone 0.05 Archaeplastida
Cre12.g505600 No alias Chromatin organisation.histones.H2B-type histone 0.04 Archaeplastida
Cre12.g506200 No alias Chromatin organisation.histones.H2B-type histone 0.05 Archaeplastida
Cre13.g570050 No alias Chromatin organisation.histones.H2B-type histone 0.05 Archaeplastida
Cre17.g709150 No alias Chromatin organisation.histones.H2B-type histone 0.05 Archaeplastida
Cre17.g710450 No alias Chromatin organisation.histones.H2B-type histone 0.05 Archaeplastida
Cre17.g711750 No alias Chromatin organisation.histones.H2B-type histone 0.05 Archaeplastida
Cre17.g713450 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre17.g714050 No alias Chromatin organisation.histones.H2B-type histone 0.04 Archaeplastida
GSVIVT01016164001 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Gb_02245 No alias histone (H2B) 0.03 Archaeplastida
Gb_12082 No alias histone (H2B) 0.06 Archaeplastida
Gb_12096 No alias histone (H2B) 0.04 Archaeplastida
Gb_26315 No alias histone (H2B) 0.05 Archaeplastida
Gb_32754 No alias histone (H2B) 0.07 Archaeplastida
LOC_Os01g05610.1 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os01g05630.1 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os01g05900.1 No alias histone (H2B) 0.04 Archaeplastida
LOC_Os01g05970.1 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os01g06010.1 No alias histone (H2B) 0.04 Archaeplastida
LOC_Os01g62230.1 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os03g17084.1 No alias histone (H2B) 0.05 Archaeplastida
LOC_Os05g49860.1 No alias histone (H2B) 0.05 Archaeplastida
LOC_Os08g38300.1 No alias histone (H2B) 0.06 Archaeplastida
MA_10428006g0010 No alias histone (H2B) 0.03 Archaeplastida
MA_10435143g0010 No alias histone (H2B) 0.05 Archaeplastida
Mp4g13450.1 No alias histone (H2B) 0.03 Archaeplastida
Mp6g04070.1 No alias histone (H2B) 0.07 Archaeplastida
Pp3c12_7610V3.1 No alias Histone superfamily protein 0.06 Archaeplastida
Pp3c13_23540V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c17_15780V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Smo182308 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Solyc02g038690.1.1 No alias histone (H2B) 0.04 Archaeplastida
Solyc05g055440.1.1 No alias histone (H2B) 0.05 Archaeplastida
Solyc06g074780.1.1 No alias histone (H2B) 0.02 Archaeplastida
Solyc06g074790.2.1 No alias histone (H2B) 0.05 Archaeplastida
Solyc06g075800.1.1 No alias histone (H2B) 0.05 Archaeplastida
Solyc11g007920.1.1 No alias histone (H2B) 0.04 Archaeplastida
Solyc11g007930.1.1 No alias histone (H2B) 0.04 Archaeplastida
Solyc11g066430.2.1 No alias histone (H2B) 0.05 Archaeplastida
Zm00001e004028_P001 No alias histone (H2B) 0.06 Archaeplastida
Zm00001e010906_P002 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e016882_P001 No alias histone (H2B) 0.05 Archaeplastida
Zm00001e020484_P002 No alias histone (H2B) 0.04 Archaeplastida
Zm00001e022201_P001 No alias histone (H2B) 0.05 Archaeplastida
Zm00001e023342_P001 No alias histone (H2B) 0.05 Archaeplastida
Zm00001e027803_P001 No alias histone (H2B) 0.04 Archaeplastida
Zm00001e038466_P001 No alias histone (H2B) 0.03 Archaeplastida
Zm00001e039057_P002 No alias histone (H2B) 0.05 Archaeplastida
Zm00001e041296_P001 No alias histone (H2B) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 5 117
No external refs found!