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  5. AT5G48710

AT5G48710


Description : Ubiquitin-like superfamily protein


Gene families : OG0000850 (Archaeplastida) Phylogenetic Tree(s): OG0000850_tree ,
OG_05_0026632 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0025046 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48710
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT5G55855 No alias Ubiquitin-like superfamily protein 0.03 Archaeplastida
Solyc03g013030.3.1 No alias ubiquitin-fold protein (SUMO) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015695 organic cation transport IEP Neighborhood
CC GO:0022627 cytosolic small ribosomal subunit IEP Neighborhood
BP GO:0030490 maturation of SSU-rRNA IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0072488 ammonium transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR022617 Rad60/SUMO-like_dom 29 99
No external refs found!