AT5G48750

Description : Cytochrome b561/ferric reductase transmembrane with DOMON related domain

Gene families : OG0000274 (Archaeplastida) Phylogenetic Tree(s): OG0000274_tree ,
OG_05_0026474 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0024858 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G48750
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00154770	evm_27.TU.AmTr_v1...	Cytochrome b561 and DOMON domain-containing protein...	0.02	Archaeplastida
GSVIVT01037693001	No alias	Cytochrome b561 and DOMON domain-containing protein...	0.03	Archaeplastida
Gb_13521	No alias	Cytochrome b561 and DOMON domain-containing protein...	0.02	Archaeplastida
LOC_Os01g66900.1	No alias	Cytochrome b561 and DOMON domain-containing protein...	0.02	Archaeplastida
LOC_Os03g09900.1	No alias	Cytochrome b561 and DOMON domain-containing protein...	0.02	Archaeplastida
Pp3c10_17260V3.1	No alias	Auxin-responsive family protein	0.02	Archaeplastida
Zm00001e034603_P001	No alias	Cytochrome b561 and DOMON domain-containing protein...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0007275	multicellular organism development	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	ISS	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030198	extracellular matrix organization	ISS	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0043062	extracellular structure organization	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	Neighborhood
MF	GO:0003725	double-stranded RNA binding	IEP	Neighborhood
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0004525	ribonuclease III activity	IEP	Neighborhood
MF	GO:0008026	ATP-dependent helicase activity	IEP	Neighborhood
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Neighborhood
MF	GO:0042623	ATPase activity, coupled	IEP	Neighborhood
BP	GO:0051026	chiasma assembly	IEP	Neighborhood
MF	GO:0070035	purine NTP-dependent helicase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005018	DOMON_domain	95	195

External Links

No external refs found!

AT5G48750

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation