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  5. MA_388061g0010

MA_388061g0010


Description : Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana (sp|o64766|pp185_arath : 271.0)


Gene families : OG0017715 (Archaeplastida) Phylogenetic Tree(s): OG0017715_tree ,
OG_05_0093264 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0016056 (SeedPlants) Phylogenetic Tree(s): OG_06_0016056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_388061g0010
Cluster HCCA: Cluster_877

Target Alias Description ECC score Gene Family Method Actions
MA_109016g0020 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.08 Archaeplastida
MA_126037g0010 No alias Pentatricopeptide repeat-containing protein At2g21090... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 46 64
IPR002885 Pentatricopeptide_repeat 335 363
IPR002885 Pentatricopeptide_repeat 216 239
IPR002885 Pentatricopeptide_repeat 242 272
IPR002885 Pentatricopeptide_repeat 304 332
IPR002885 Pentatricopeptide_repeat 274 302
IPR002885 Pentatricopeptide_repeat 113 136
IPR002885 Pentatricopeptide_repeat 138 186
IPR002885 Pentatricopeptide_repeat 364 411
No external refs found!