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  5. MA_393193g0010

MA_393193g0010


Description : oxygen-dependent coproporphyrinogen III oxidase (HemF)


Gene families : OG0003058 (Archaeplastida) Phylogenetic Tree(s): OG0003058_tree ,
OG_05_0003818 (LandPlants) Phylogenetic Tree(s): OG_05_0003818_tree ,
OG_06_0005024 (SeedPlants) Phylogenetic Tree(s): OG_06_0005024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_393193g0010
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00226710 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol... 0.03 Archaeplastida
AT1G03475 ATCPO-I, LIN2, HEMF1 Coproporphyrinogen III oxidase 0.03 Archaeplastida
Cre02.g085450 No alias Coenzyme metabolism.tetrapyrrol... 0.02 Archaeplastida
Cre02.g092600 No alias Coenzyme metabolism.tetrapyrrol... 0.07 Archaeplastida
GSVIVT01015906001 No alias Coenzyme metabolism.tetrapyrrol... 0.06 Archaeplastida
Mp3g17410.1 No alias oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.06 Archaeplastida
Pp3c22_5800V3.1 No alias Coproporphyrinogen III oxidase 0.08 Archaeplastida
Smo131328 No alias Coenzyme metabolism.tetrapyrrol... 0.05 Archaeplastida
Solyc10g005110.3.1 No alias oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.04 Archaeplastida
Zm00001e006977_P001 No alias oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEA Interproscan
BP GO:0006779 porphyrin-containing compound biosynthetic process IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006433 prolyl-tRNA aminoacylation IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016851 magnesium chelatase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Neighborhood
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Neighborhood
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001260 Coprogen_oxidase_aer 1 78
No external refs found!