MA_399298g0010

Description : RNA editing factor (CRR21)

Gene families : OG0022992 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0021974 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0021354 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_399298g0010
Cluster	HCCA: Cluster_308

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_10776	No alias	Pentatricopeptide repeat-containing protein At1g11290,...	0.05	Archaeplastida
Gb_10783	No alias	Pentatricopeptide repeat-containing protein At1g11290,...	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	662	716
IPR002885	Pentatricopeptide_repeat	490	536
IPR002885	Pentatricopeptide_repeat	116	163
IPR002885	Pentatricopeptide_repeat	217	264
IPR002885	Pentatricopeptide_repeat	463	484
IPR002885	Pentatricopeptide_repeat	564	587
IPR002885	Pentatricopeptide_repeat	292	319
IPR002885	Pentatricopeptide_repeat	341	399

External Links

No external refs found!

MA_399298g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation