AT5G49270 (COBL9, MRH4, SHV2, DER9)

Aliases : COBL9, MRH4, SHV2, DER9

Description : COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family

Gene families : OG0001802 (Archaeplastida) Phylogenetic Tree(s): OG0001802_tree ,
OG_05_0001593 (LandPlants) Phylogenetic Tree(s): OG_05_0001593_tree ,
OG_06_0001646 (SeedPlants) Phylogenetic Tree(s): OG_06_0001646_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G49270
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00182490	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.05	Archaeplastida
AT3G20580	COBL10	COBRA-like protein 10 precursor	0.07	Archaeplastida
AT4G27110	COBL11	COBRA-like protein 11 precursor	0.06	Archaeplastida
GSVIVT01012641001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.06	Archaeplastida
LOC_Os03g18910.1	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.04	Archaeplastida
LOC_Os06g47110.1	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.06	Archaeplastida
Mp1g17600.1	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.05	Archaeplastida
Mp1g18890.1	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida
Pp3c14_12030V3.1	No alias	COBRA-like protein-7 precursor	0.02	Archaeplastida
Pp3c17_6920V3.1	No alias	COBRA-like protein-7 precursor	0.02	Archaeplastida
Pp3c1_25450V3.1	No alias	COBRA-like protein-7 precursor	0.05	Archaeplastida
Pp3c25_1920V3.1	No alias	COBRA-like protein-7 precursor	0.04	Archaeplastida
Pp3c2_18020V3.1	No alias	COBRA-like protein-7 precursor	0.06	Archaeplastida
Pp3c6_14750V3.1	No alias	COBRA-like protein-7 precursor	0.02	Archaeplastida
Solyc07g064200.4.1	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.04	Archaeplastida
Solyc09g075540.1.1	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.04	Archaeplastida
Zm00001e001386_P001	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.03	Archaeplastida
Zm00001e035133_P001	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009932	cell tip growth	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010053	root epidermal cell differentiation	IMP	Interproscan
BP	GO:0010054	trichoblast differentiation	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	TAS	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048527	lateral root development	RCA	Interproscan
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	RCA	Interproscan
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	IMP	Interproscan
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048767	root hair elongation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0090696	post-embryonic plant organ development	None	Extended
BP	GO:0099402	plant organ development	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
MF	GO:0003680	AT DNA binding	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005385	zinc ion transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006749	glutathione metabolic process	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0006829	zinc ion transport	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
MF	GO:0008446	GDP-mannose 4,6-dehydratase activity	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
CC	GO:0009505	plant-type cell wall	IEP	Neighborhood
CC	GO:0009531	secondary cell wall	IEP	Neighborhood
BP	GO:0009647	skotomorphogenesis	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
BP	GO:0009828	plant-type cell wall loosening	IEP	Neighborhood
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
MF	GO:0009927	histidine phosphotransfer kinase activity	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0010410	hemicellulose metabolic process	IEP	Neighborhood
BP	GO:0010411	xyloglucan metabolic process	IEP	Neighborhood
MF	GO:0015020	glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
BP	GO:0016128	phytosteroid metabolic process	IEP	Neighborhood
BP	GO:0016129	phytosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0016131	brassinosteroid metabolic process	IEP	Neighborhood
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
MF	GO:0030775	glucuronoxylan 4-O-methyltransferase activity	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0035864	response to potassium ion	IEP	Neighborhood
BP	GO:0035865	cellular response to potassium ion	IEP	Neighborhood
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Neighborhood
BP	GO:0048766	root hair initiation	IEP	Neighborhood
BP	GO:0055062	phosphate ion homeostasis	IEP	Neighborhood
BP	GO:0055083	monovalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0071365	cellular response to auxin stimulus	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0072506	trivalent inorganic anion homeostasis	IEP	Neighborhood
MF	GO:0072509	divalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0072732	cellular response to calcium ion starvation	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	232	411

External Links

No external refs found!

AT5G49270 (COBL9, MRH4, SHV2, DER9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation