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  5. MA_4032367g0010

MA_4032367g0010


Description : Ribonuclease 3 OS=Arabidopsis thaliana (sp|p42815|rns3_arath : 86.3)


Gene families : OG0000815 (Archaeplastida) Phylogenetic Tree(s): OG0000815_tree ,
OG_05_0002179 (LandPlants) Phylogenetic Tree(s): OG_05_0002179_tree ,
OG_06_0006777 (SeedPlants) Phylogenetic Tree(s): OG_06_0006777_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_4032367g0010
Cluster HCCA: Cluster_367

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262550 evm_27.TU.AmTr_v1... Extracellular ribonuclease LE OS=Solanum lycopersicum 0.03 Archaeplastida
AMTR_s00064p00080140 evm_27.TU.AmTr_v1... Ribonuclease 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00064p00084600 evm_27.TU.AmTr_v1... Ribonuclease 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G26820 RNS3 ribonuclease 3 0.03 Archaeplastida
Cre06.g306550 No alias Ribonuclease 2 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01010088001 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum 0.03 Archaeplastida
GSVIVT01019974001 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum 0.03 Archaeplastida
Gb_01128 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.02 Archaeplastida
Gb_30835 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_30836 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os07g43600.1 No alias Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.01 Archaeplastida
LOC_Os07g43670.1 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g36700.1 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_8445917g0010 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc04g005640.3.1 No alias Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0033897 ribonuclease T2 activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 14 79
No external refs found!