MA_40328g0010

Description : ABC transporter B family member 20 OS=Arabidopsis thaliana (sp|q9m3b9|ab20b_arath : 695.0)

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0002865 (LandPlants) Phylogenetic Tree(s): OG_05_0002865_tree ,
OG_06_0003291 (SeedPlants) Phylogenetic Tree(s): OG_06_0003291_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_40328g0010
Cluster	HCCA: Cluster_210

Target	Alias	Description	ECC score	Gene Family Method
AT2G39480	PGP6	P-glycoprotein 6	0.03	Archaeplastida
Gb_20009	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_31652	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os01g52550.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g74470.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os02g46680.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os03g17180.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os05g47500.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Mp2g02910.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	Archaeplastida
Mp2g06270.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Pp3c6_7260V3.1	No alias	ATP binding cassette subfamily B19	0.04	Archaeplastida
Smo139408	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo231714	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc03g093650.3.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Solyc04g010310.4.1	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Zm00001e001258_P003	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e018488_P001	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e038462_P002	No alias	subfamily ABCB transporter	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
MF	GO:0019208	phosphatase regulator activity	IEP	Neighborhood
MF	GO:0019888	protein phosphatase regulator activity	IEP	Neighborhood
BP	GO:0051259	protein complex oligomerization	IEP	Neighborhood
BP	GO:0051260	protein homooligomerization	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	213	361
IPR011527	ABC1_TM_dom	36	142

External Links

No external refs found!

MA_40328g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation