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MA_40517g0010


Description : Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana (sp|q9smz2|pp347_arath : 339.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0023542 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_40517g0010
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G08070 OTP82 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
AT1G59720 CRR28 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
AT5G39350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
LOC_Os01g60430.1 No alias RNA editing factor (MEF10) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 88 120
IPR002885 Pentatricopeptide_repeat 197 222
IPR002885 Pentatricopeptide_repeat 263 291
No external refs found!