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  5. MA_407206g0010

MA_407206g0010


Description : transcription factor (YABBY)


Gene families : OG0000890 (Archaeplastida) Phylogenetic Tree(s): OG0000890_tree ,
OG_05_0093297 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0074249 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_407206g0010
Cluster HCCA: Cluster_416

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT1G69180 CRC Plant-specific transcription factor YABBY family protein 0.02 Archaeplastida
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.02 Archaeplastida
GSVIVT01012246001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01022586001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01027648001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
LOC_Os03g44710.2 No alias transcription factor (YABBY) 0.06 Archaeplastida
LOC_Os07g06620.2 No alias transcription factor (YABBY) 0.05 Archaeplastida
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
LOC_Os12g42610.1 No alias transcription factor (YABBY) 0.02 Archaeplastida
Solyc01g010240.3.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
Solyc05g005240.2.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc11g071810.2.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e000845_P005 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e004396_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e012387_P001 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e012388_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e015245_P002 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e035310_P003 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e038717_P002 No alias transcription factor (YABBY) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006780 YABBY 12 165
No external refs found!