AT5G49620 (AtMYB78, MYB78)

Aliases : AtMYB78, MYB78

Description : myb domain protein 78

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000113 (SeedPlants) Phylogenetic Tree(s): OG_06_0000113_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G49620
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00252990	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00024p00137930	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
AT1G35515	MYB8, HOS10	high response to osmotic stress 10	0.04	Archaeplastida
AT1G68320	BW62B, BW62C,...	myb domain protein 62	0.02	Archaeplastida
AT2G47190	MYB2, ATMYB2	myb domain protein 2	0.04	Archaeplastida
AT3G02940	AtMYB107, MYB107	myb domain protein 107	0.03	Archaeplastida
AT3G18100	MYB4R1, AtMYB4R1	myb domain protein 4r1	0.03	Archaeplastida
AT3G48920	MYB45, AtMYB45	myb domain protein 45	0.04	Archaeplastida
AT3G49690	MYB84, RAX3, ATMYB84	myb domain protein 84	0.03	Archaeplastida
AT4G17785	MYB39	myb domain protein 39	0.04	Archaeplastida
AT4G21440	ATMYB102, ATM4, MYB102	MYB-like 102	0.02	Archaeplastida
AT5G39700	MYB89, AtMYB89	myb domain protein 89	0.02	Archaeplastida
AT5G52260	MYB19, AtMYB19	myb domain protein 19	0.04	Archaeplastida
AT5G54230	MYB49, AtMYB49	myb domain protein 49	0.1	Archaeplastida
AT5G57620	MYB36, AtMYB36	myb domain protein 36	0.03	Archaeplastida
AT5G65790	MYB68, ATMYB68	myb domain protein 68	0.03	Archaeplastida
Cre03.g197100	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01025269001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01028235001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01030708001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01032088001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
Gb_01889	No alias	transcription factor (MYB)	0.02	Archaeplastida
Gb_05115	No alias	transcription factor (MYB)	0.03	Archaeplastida
Gb_22885	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os01g07450.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os03g18480.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os08g05520.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os09g36250.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
LOC_Os12g07640.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_14061g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_1589g0010	No alias	transcription factor (MYB)	0.06	Archaeplastida
MA_322432g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_8147g0020	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_948059g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
Mp2g22560.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Mp5g22280.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Pp3c19_20750V3.1	No alias	myb domain protein 20	0.03	Archaeplastida
Pp3c9_24170V3.1	No alias	myb domain protein 33	0.02	Archaeplastida
Solyc01g010910.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc02g067760.4.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc02g086690.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc05g014290.4.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc06g005330.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc06g074910.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc10g055410.2.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e009849_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e015125_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e016583_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e016791_P001	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e020004_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e026426_P001	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e032347_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	IEP	Neighborhood
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006855	drug transmembrane transport	IEP	Neighborhood
BP	GO:0006862	nucleotide transport	IEP	Neighborhood
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Neighborhood
BP	GO:0009806	lignan metabolic process	IEP	Neighborhood
BP	GO:0009807	lignan biosynthetic process	IEP	Neighborhood
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Neighborhood
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0010941	regulation of cell death	IEP	Neighborhood
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015696	ammonium transport	IEP	Neighborhood
BP	GO:0015748	organophosphate ester transport	IEP	Neighborhood
BP	GO:0015802	basic amino acid transport	IEP	Neighborhood
BP	GO:0015893	drug transport	IEP	Neighborhood
BP	GO:0018904	ether metabolic process	IEP	Neighborhood
BP	GO:0031347	regulation of defense response	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
MF	GO:0042349	guiding stereospecific synthesis activity	IEP	Neighborhood
BP	GO:0043067	regulation of programmed cell death	IEP	Neighborhood
BP	GO:0043090	amino acid import	IEP	Neighborhood
BP	GO:0045088	regulation of innate immune response	IEP	Neighborhood
BP	GO:0045927	positive regulation of growth	IEP	Neighborhood
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
BP	GO:0050776	regulation of immune response	IEP	Neighborhood
BP	GO:0065001	specification of axis polarity	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0080134	regulation of response to stress	IEP	Neighborhood
BP	GO:0080135	regulation of cellular response to stress	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
BP	GO:1901503	ether biosynthetic process	IEP	Neighborhood
BP	GO:1901598	(-)-pinoresinol metabolic process	IEP	Neighborhood
BP	GO:1901599	(-)-pinoresinol biosynthetic process	IEP	Neighborhood
BP	GO:2000603	regulation of secondary growth	IEP	Neighborhood
BP	GO:2000605	positive regulation of secondary growth	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	28	75
IPR001005	SANT/Myb	81	124

External Links

No external refs found!

AT5G49620 (AtMYB78, MYB78)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation