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  5. AT5G49680

AT5G49680


No description available


Gene families : OG0002914 (Archaeplastida) Phylogenetic Tree(s): OG0002914_tree ,
OG_05_0004076 (LandPlants) Phylogenetic Tree(s): OG_05_0004076_tree ,
OG_06_0003924 (SeedPlants) Phylogenetic Tree(s): OG_06_0003924_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G49680
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
MA_10435339g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435593g0010 No alias Protein SABRE OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c12_12980V3.1 No alias Golgi-body localisation protein domain ;RNA pol II... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000059 obsolete protein import into nucleus, docking IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
MF GO:0004647 phosphoserine phosphatase activity IEP Neighborhood
MF GO:0004835 tubulin-tyrosine ligase activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005343 organic acid:sodium symporter activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005635 nuclear envelope IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Neighborhood
MF GO:0008508 bile acid:sodium symporter activity IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
MF GO:0015125 bile acid transmembrane transporter activity IEP Neighborhood
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP Neighborhood
MF GO:0015370 solute:sodium symporter activity IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033233 regulation of protein sumoylation IEP Neighborhood
BP GO:0033234 negative regulation of protein sumoylation IEP Neighborhood
MF GO:0035197 siRNA binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0060341 regulation of cellular localization IEP Neighborhood
MF GO:0061980 regulatory RNA binding IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140161 monocarboxylate:sodium symporter activity IEP Neighborhood
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Neighborhood
BP GO:1903320 regulation of protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:1903321 negative regulation of protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:1903827 regulation of cellular protein localization IEP Neighborhood
BP GO:2000008 regulation of protein localization to cell surface IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!