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  5. MA_41430g0020

MA_41430g0020


Description : Pentatricopeptide repeat-containing protein At1g71210, mitochondrial OS=Arabidopsis thaliana (sp|q8gza6|pp113_arath : 455.0)


Gene families : OG0006096 (Archaeplastida) Phylogenetic Tree(s): OG0006096_tree ,
OG_05_0004418 (LandPlants) Phylogenetic Tree(s): OG_05_0004418_tree ,
OG_06_0003203 (SeedPlants) Phylogenetic Tree(s): OG_06_0003203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_41430g0020
Cluster HCCA: Cluster_539

Target Alias Description ECC score Gene Family Method Actions
Pp3c1_6490V3.1 No alias proton gradient regulation 3 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 749 773
IPR002885 Pentatricopeptide_repeat 711 739
IPR002885 Pentatricopeptide_repeat 376 404
IPR002885 Pentatricopeptide_repeat 572 600
IPR002885 Pentatricopeptide_repeat 411 440
IPR002885 Pentatricopeptide_repeat 203 245
IPR002885 Pentatricopeptide_repeat 268 316
IPR002885 Pentatricopeptide_repeat 847 895
IPR002885 Pentatricopeptide_repeat 637 685
No external refs found!