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  5. MA_417755g0010

MA_417755g0010


Description : plastidial mRNA processing factor (PPR10)


Gene families : OG0002673 (Archaeplastida) Phylogenetic Tree(s): OG0002673_tree ,
OG_05_0001952 (LandPlants) Phylogenetic Tree(s): OG_05_0001952_tree ,
OG_06_0001479 (SeedPlants) Phylogenetic Tree(s): OG_06_0001479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_417755g0010
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g40120.1 No alias plastidial mRNA processing factor (PPR10) 0.03 Archaeplastida
Zm00001e035434_P001 No alias plastidial mRNA processing factor (PPR10) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 491 520
IPR002885 Pentatricopeptide_repeat 523 572
IPR002885 Pentatricopeptide_repeat 242 288
IPR002885 Pentatricopeptide_repeat 663 710
IPR002885 Pentatricopeptide_repeat 733 781
IPR002885 Pentatricopeptide_repeat 300 361
IPR002885 Pentatricopeptide_repeat 408 467
IPR002885 Pentatricopeptide_repeat 788 813
No external refs found!