MA_41800g0010


Description : no hits & (original description: none)


Gene families : OG0002230 (Archaeplastida) Phylogenetic Tree(s): OG0002230_tree ,
OG_05_0097928 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0079351 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_41800g0010
Cluster HCCA: Cluster_437

Target Alias Description ECC score Gene Family Method Actions
Gb_09005 No alias no description available(sp|d5lxj0|cip73_lotja : 275.0) 0.05 Archaeplastida
Gb_30758 No alias no description available(sp|d5lxj0|cip73_lotja : 374.0) 0.04 Archaeplastida
MA_10436508g0010 No alias no description available(sp|d5lxj0|cip73_lotja : 103.0) 0.03 Archaeplastida
Mp7g19730.1 No alias no description available(sp|d5lxj0|cip73_lotja : 174.0) 0.03 Archaeplastida
Pp3c1_29440V3.1 No alias Ubiquitin-like superfamily protein 0.02 Archaeplastida
Pp3c2_12670V3.1 No alias Ubiquitin-like superfamily protein 0.03 Archaeplastida
Smo403529 No alias No description available 0.09 Archaeplastida
Zm00001e006652_P005 No alias no description available(sp|d5lxj0|cip73_lotja : 224.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!