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  5. MA_418299g0010

MA_418299g0010


Description : GARP-specific component VPS54 of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes


Gene families : OG0002922 (Archaeplastida) Phylogenetic Tree(s): OG0002922_tree ,
OG_05_0005032 (LandPlants) Phylogenetic Tree(s): OG_05_0005032_tree ,
OG_06_0004597 (SeedPlants) Phylogenetic Tree(s): OG_06_0004597_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_418299g0010
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.25 No alias No description available 0.01 Archaeplastida
Cre02.g087551 No alias Vesicle trafficking.target membrane tethering.GARP/EARP... 0.01 Archaeplastida
Pp3c11_18680V3.1 No alias VPS54 0.02 Archaeplastida
Solyc02g030100.4.1 No alias Vacuolar protein sorting-associated protein 54,... 0.02 Archaeplastida
Solyc02g030110.2.1 No alias GARP-specific component VPS54 of GARP/EARP... 0.03 Archaeplastida
Zm00001e040599_P001 No alias GARP-specific component VPS54 of GARP/EARP... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!