MA_42556g0010

Description : subfamily ABCC transporter

Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree ,
OG_05_0000437 (LandPlants) Phylogenetic Tree(s): OG_05_0000437_tree ,
OG_06_0000372 (SeedPlants) Phylogenetic Tree(s): OG_06_0000372_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_42556g0010
Cluster	HCCA: Cluster_436

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00226840	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00056p00229050	evm_27.TU.AmTr_v1...	ABC transporter C family member 8 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00092p00037330	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00263p00014290	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00507p00011670	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Cpa\|evm.model.tig00020723.5	No alias	ABC transporter C family member 13 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cre04.g228650	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01021595001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Gb_14726	No alias	ABC transporter C family member 8 OS=Arabidopsis...	0.02	Archaeplastida
LOC_Os04g13220.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
LOC_Os04g49890.1	No alias	subfamily ABCC transporter	0.06	Archaeplastida
LOC_Os04g52900.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
LOC_Os06g06440.1	No alias	subfamily ABCC transporter	0.04	Archaeplastida
MA_211762g0010	No alias	ABC transporter C family member 14 OS=Arabidopsis...	0.04	Archaeplastida
MA_556337g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_607295g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_837292g0010	No alias	ABC transporter C family member 5 OS=Arabidopsis...	0.04	Archaeplastida
Mp5g02230.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
Smo81581	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo90238	No alias	Solute transport.primary active transport.ABC...	0.07	Archaeplastida
Solyc07g065320.4.1	No alias	subfamily ABCC transporter	0.02	Archaeplastida
Zm00001e026288_P002	No alias	subfamily ABCC transporter	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006364	rRNA processing	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0009892	negative regulation of metabolic process	IEP	Neighborhood
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010629	negative regulation of gene expression	IEP	Neighborhood
BP	GO:0016072	rRNA metabolic process	IEP	Neighborhood
BP	GO:0016458	gene silencing	IEP	Neighborhood
BP	GO:0031047	gene silencing by RNA	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	669	803
IPR011527	ABC1_TM_dom	1012	1230
IPR011527	ABC1_TM_dom	339	604

External Links

No external refs found!

MA_42556g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation