MA_426345g0010


Description : no hits & (original description: none)


Gene families : OG0003731 (Archaeplastida) Phylogenetic Tree(s): OG0003731_tree ,
OG_05_0002581 (LandPlants) Phylogenetic Tree(s): OG_05_0002581_tree ,
OG_06_0002001 (SeedPlants) Phylogenetic Tree(s): OG_06_0002001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_426345g0010
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00242060 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01029257001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
MA_179334g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c18_7100V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc05g018310.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc07g007440.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e013130_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!