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  5. MA_43248g0010

MA_43248g0010


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000216 (SeedPlants) Phylogenetic Tree(s): OG_06_0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_43248g0010
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00149380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G20395 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G09100 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01008756001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_05004 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
Gb_07702 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10428061g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.04 Archaeplastida
MA_5170g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_61349g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_634100g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g005310.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!