1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_4349g0020

MA_4349g0020


Description : ARF-GTPase


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree ,
OG_06_0000536 (SeedPlants) Phylogenetic Tree(s): OG_06_0000536_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_4349g0020
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00193260 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
AMTR_s00096p00110370 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
AT3G62290 ARFA1E, ATARFA1E ADP-ribosylation factor A1E 0.02 Archaeplastida
Cre12.g486250 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
Gb_25641 No alias ARF-GTPase 0.02 Archaeplastida
LOC_Os05g41060.1 No alias ARF-GTPase 0.02 Archaeplastida
Mp3g13920.1 No alias ARF-GTPase 0.03 Archaeplastida
Mp8g07320.1 No alias ARF-GTPase 0.02 Archaeplastida
Pp3c10_20740V3.1 No alias ADP-ribosylation factor A1E 0.02 Archaeplastida
Pp3c12_14910V3.1 No alias ADP-ribosylation factor A1E 0.03 Archaeplastida
Pp3c12_14940V3.1 No alias ADP-ribosylation factor A1E 0.01 Archaeplastida
Pp3c12_14945V3.1 No alias ADP-ribosylation factor A1E 0.01 Archaeplastida
Pp3c4_20580V3.1 No alias ADP-ribosylation factor A1E 0.02 Archaeplastida
Pp3c9_17560V3.1 No alias ADP-ribosylation factor 3 0.02 Archaeplastida
Solyc01g008000.3.1 No alias ARF-GTPase 0.03 Archaeplastida
Zm00001e011790_P001 No alias ARF-GTPase 0.02 Archaeplastida
Zm00001e033127_P003 No alias ARF-GTPase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
CC GO:0035145 exon-exon junction complex IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!