MA_44386g0010

Description : histone chaperone (HIRA)

Gene families : OG0005208 (Archaeplastida) Phylogenetic Tree(s): OG0005208_tree ,
OG_05_0006323 (LandPlants) Phylogenetic Tree(s): OG_05_0006323_tree ,
OG_06_0008319 (SeedPlants) Phylogenetic Tree(s): OG_06_0008319_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_44386g0010
Cluster	HCCA: Cluster_393

Target	Alias	Description	ECC score	Gene Family Method
AT3G44530	HIRA	homolog of histone chaperone HIRA	0.06	Archaeplastida
GSVIVT01036170001	No alias	Chromatin organisation.histone chaperone...	0.03	Archaeplastida
LOC_Os09g39420.1	No alias	histone chaperone (HIRA)	0.04	Archaeplastida
Mp1g07150.1	No alias	histone chaperone (HIRA)	0.02	Archaeplastida
Pp3c16_16320V3.1	No alias	homolog of histone chaperone HIRA	0.02	Archaeplastida
Solyc11g067200.2.1	No alias	histone chaperone (HIRA)	0.04	Archaeplastida
Zm00001e016618_P001	No alias	histone chaperone (HIRA)	0.06	Archaeplastida
Zm00001e033573_P005	No alias	histone chaperone (HIRA)	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0005049	nuclear export signal receptor activity	IEP	Neighborhood
MF	GO:0005096	GTPase activator activity	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
MF	GO:0008047	enzyme activator activity	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0016579	protein deubiquitination	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Neighborhood
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Neighborhood
MF	GO:0140104	molecular carrier activity	IEP	Neighborhood
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011494	Hira	671	871
IPR001680	WD40_repeat	82	119
IPR001680	WD40_repeat	24	58
IPR001680	WD40_repeat	126	160
IPR001680	WD40_repeat	304	331

External Links

No external refs found!

MA_44386g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation