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  5. MA_44428g0010

MA_44428g0010


Description : transcription factor (MADS/AGL)


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0011374 (LandPlants) Phylogenetic Tree(s): OG_05_0011374_tree ,
OG_06_0019966 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_44428g0010
Cluster HCCA: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
MA_25342g0010 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
MA_6544g0010 No alias Floral homeotic protein AGAMOUS OS=Panax ginseng... 0.04 Archaeplastida
Pp3c12_22890V3.1 No alias AGAMOUS-like 66 0.02 Archaeplastida
Solyc01g106700.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e021861_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e029170_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e032487_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 41 88
No external refs found!