MA_448625g0010

Description : SGS3 stabilization factor of DNA methylation pathway

Gene families : OG0002118 (Archaeplastida) Phylogenetic Tree(s): OG0002118_tree ,
OG_05_0001921 (LandPlants) Phylogenetic Tree(s): OG_05_0001921_tree ,
OG_06_0009218 (SeedPlants) Phylogenetic Tree(s): OG_06_0009218_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_448625g0010
Cluster	HCCA: Cluster_277

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01000245001	No alias	Chromatin organisation.DNA methylation.non-canonical...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016458	gene silencing	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031047	gene silencing by RNA	IEA	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0004555	alpha,alpha-trehalase activity	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
MF	GO:0015927	trehalase activity	IEP	Neighborhood
BP	GO:0016197	endosomal transport	IEP	Neighborhood
BP	GO:0016482	cytosolic transport	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
CC	GO:0030906	retromer, cargo-selective complex	IEP	Neighborhood
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005381	Znf-XS_domain	282	320

External Links

No external refs found!