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  5. MA_450924g0010

MA_450924g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 286.0)


Gene families : OG0006958 (Archaeplastida) Phylogenetic Tree(s): OG0006958_tree ,
OG_05_0011968 (LandPlants) Phylogenetic Tree(s): OG_05_0011968_tree ,
OG_06_0014881 (SeedPlants) Phylogenetic Tree(s): OG_06_0014881_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_450924g0010

Target Alias Description ECC score Gene Family Method Actions
Gb_23085 No alias RNA editing factor (MEF19) 0.03 Archaeplastida
Gb_33311 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
MA_13022g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
MA_35889g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Smo114085 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.02 Archaeplastida
Smo413277 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 170 193
IPR002885 Pentatricopeptide_repeat 94 142
IPR002885 Pentatricopeptide_repeat 1 40
No external refs found!