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  5. AT5G51410

AT5G51410


Description : LUC7 N_terminus domain-containing protein


Gene families : OG0005265 (Archaeplastida) Phylogenetic Tree(s): OG0005265_tree ,
OG_05_0004961 (LandPlants) Phylogenetic Tree(s): OG_05_0004961_tree ,
OG_06_0006913 (SeedPlants) Phylogenetic Tree(s): OG_06_0006913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G51410
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Cre14.g621300 No alias No description available 0.03 Archaeplastida
GSVIVT01018660001 No alias No description available 0.03 Archaeplastida
LOC_Os07g27300.2 No alias pre-mRNA-processing protein (LUC7) 0.07 Archaeplastida
Mp2g06220.1 No alias pre-mRNA-processing protein (LUC7) 0.06 Archaeplastida
Mp8g04110.1 No alias pre-mRNA-processing protein (LUC7) 0.03 Archaeplastida
Pp3c15_9680V3.1 No alias LUC7 N_terminus domain-containing protein 0.04 Archaeplastida
Smo149618 No alias No description available 0.05 Archaeplastida
Solyc03g093160.3.1 No alias pre-mRNA-processing protein (LUC7) 0.05 Archaeplastida
Zm00001e009535_P001 No alias No annotation 0.04 Archaeplastida
Zm00001e033431_P001 No alias pre-mRNA-processing protein (LUC7) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding TAS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000278 mitotic cell cycle IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0005249 voltage-gated potassium channel activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
CC GO:0008076 voltage-gated potassium channel complex IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009870 defense response signaling pathway, resistance gene-dependent IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0009895 negative regulation of catabolic process IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010204 defense response signaling pathway, resistance gene-independent IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016926 protein desumoylation IEP Neighborhood
MF GO:0017091 AU-rich element binding IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
MF GO:0022843 voltage-gated cation channel activity IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031329 regulation of cellular catabolic process IEP Neighborhood
BP GO:0031330 negative regulation of cellular catabolic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
CC GO:0034702 ion channel complex IEP Neighborhood
CC GO:0034703 cation channel complex IEP Neighborhood
CC GO:0034705 potassium channel complex IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043487 regulation of RNA stability IEP Neighborhood
BP GO:0043488 regulation of mRNA stability IEP Neighborhood
BP GO:0043489 RNA stabilization IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0048255 mRNA stabilization IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0061013 regulation of mRNA catabolic process IEP Neighborhood
MF GO:0070063 RNA polymerase binding IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0070878 primary miRNA binding IEP Neighborhood
MF GO:0070883 pre-miRNA binding IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1902369 negative regulation of RNA catabolic process IEP Neighborhood
BP GO:1902373 negative regulation of mRNA catabolic process IEP Neighborhood
CC GO:1902495 transmembrane transporter complex IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903311 regulation of mRNA metabolic process IEP Neighborhood
BP GO:1903312 negative regulation of mRNA metabolic process IEP Neighborhood
BP GO:1903409 reactive oxygen species biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1990351 transporter complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004882 Luc7-rel 2 246
No external refs found!