MA_462184g0010


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 583.0)


Gene families : OG0018005 (Archaeplastida) Phylogenetic Tree(s): OG0018005_tree ,
OG_05_0011961 (LandPlants) Phylogenetic Tree(s): OG_05_0011961_tree ,
OG_06_0014094 (SeedPlants) Phylogenetic Tree(s): OG_06_0014094_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_462184g0010
Cluster HCCA: Cluster_362


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 598 627
IPR002885 Pentatricopeptide_repeat 516 539
IPR032867 DYW_dom 631 754
IPR002885 Pentatricopeptide_repeat 138 185
IPR002885 Pentatricopeptide_repeat 440 488
IPR002885 Pentatricopeptide_repeat 239 282
IPR002885 Pentatricopeptide_repeat 340 385
No external refs found!