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  5. MA_46520g0010

MA_46520g0010


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0021205 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_46520g0010
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00087770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G29160 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT2G28510 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01021212001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_07177 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g38870.1 No alias transcription factor (DOF) 0.09 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os07g13260.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Pp3c13_2000V3.1 No alias cycling DOF factor 3 0.02 Archaeplastida
Pp3c17_23300V3.1 No alias cycling DOF factor 3 0.02 Archaeplastida
Pp3c6_13360V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e011750_P002 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e012437_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e012824_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e028672_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 55 112
No external refs found!