AT1G25470


Description : AP2 domain-containing transcription factor family protein


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G25470
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011465001 No alias External stimuli response.biotic... 0.02 Archaeplastida
Gb_07475 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_29220 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_29359 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
LOC_Os01g73770.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os03g15660.1 No alias Ethylene-responsive transcription factor ERF012... 0.03 Archaeplastida
LOC_Os04g46410.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g55520.1 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
Mp5g02590.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Pp3c1_27630V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c6_20480V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Solyc03g118190.4.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g124110.2.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 Archaeplastida
Solyc05g051200.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e010609_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Zm00001e015429_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0009555 pollen development IMP Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004448 isocitrate dehydrogenase activity IEP Neighborhood
MF GO:0004449 isocitrate dehydrogenase (NAD+) activity IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006102 isocitrate metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0009786 regulation of asymmetric cell division IEP Neighborhood
MF GO:0015925 galactosidase activity IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!