MA_47367g0010

Description : transcription factor (SBP)

Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_47367g0010
Cluster	HCCA: Cluster_525

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00198330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.02	Archaeplastida
AT1G02065	SPL8	squamosa promoter binding protein-like 8	0.03	Archaeplastida
AT5G50570	SPL13, SPL13A	Squamosa promoter-binding protein-like (SBP domain)...	0.04	Archaeplastida
AT5G50670	SPL13, SPL13B	Squamosa promoter-binding protein-like (SBP domain)...	0.04	Archaeplastida
Cre02.g104700	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.02	Archaeplastida
Cre02.g112750	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.03	Archaeplastida
GSVIVT01003836001	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.04	Archaeplastida
LOC_Os01g69830.1	No alias	transcription factor (SBP)	0.02	Archaeplastida
MA_10427464g0020	No alias	Squamosa promoter-binding-like protein 14 OS=Arabidopsis...	0.05	Archaeplastida
MA_10427464g0040	No alias	transcription factor (SBP)	0.03	Archaeplastida
MA_10434066g0020	No alias	Squamosa promoter-binding-like protein 15 OS=Oryza...	0.04	Archaeplastida
Solyc05g015510.3.1	No alias	transcription factor (SBP)	0.03	Archaeplastida
Zm00001e010443_P001	No alias	transcription factor (SBP)	0.02	Archaeplastida
Zm00001e013795_P002	No alias	transcription factor (SBP)	0.02	Archaeplastida
Zm00001e024393_P001	No alias	transcription factor (SBP)	0.03	Archaeplastida
Zm00001e041526_P001	No alias	transcription factor (SBP)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
CC	GO:0044217	other organism part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	210	283

External Links

No external refs found!