AT5G52250 (RUP1)


Aliases : RUP1

Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0007809 (Archaeplastida) Phylogenetic Tree(s): OG0007809_tree ,
OG_05_0005588 (LandPlants) Phylogenetic Tree(s): OG_05_0005588_tree ,
OG_06_0006892 (SeedPlants) Phylogenetic Tree(s): OG_06_0006892_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52250
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
MA_501402g0010 No alias protein kinase (PEK) 0.03 Archaeplastida
MA_7918676g0010 No alias WD repeat-containing protein RUP1 OS=Arabidopsis... 0.04 Archaeplastida
Smo444188 No alias WD repeat-containing protein RUP1 OS=Arabidopsis thaliana 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005834 heterotrimeric G-protein complex ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009744 response to sucrose RCA Interproscan
BP GO:0009813 flavonoid biosynthetic process RCA Interproscan
BP GO:0010114 response to red light IEP Interproscan
BP GO:0010218 response to far red light IEP Interproscan
BP GO:0010224 response to UV-B IGI Interproscan
BP GO:0010224 response to UV-B IEP Interproscan
BP GO:0010224 response to UV-B RCA Interproscan
BP GO:0043496 regulation of protein homodimerization activity IDA Interproscan
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 163 196
IPR001680 WD40_repeat 290 328
IPR001680 WD40_repeat 248 283
No external refs found!