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Description : no hits & (original description: none)
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_476625g0010 | |
| Cluster | HCCA: Cluster_464 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00186640 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
| AMTR_s00039p00189000 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
| AMTR_s00120p00111300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
| AT1G11920 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT3G27400 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| AT4G13210 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT5G04310 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
| AT5G55720 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01003984001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | Archaeplastida | |
| Gb_02248 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| Gb_19802 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| LOC_Os04g05050.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_101171g0010 | No alias | pectate lyase | 0.07 | Archaeplastida | |
| MA_10205415g0010 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| MA_103716g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_10426822g0020 | No alias | pectate lyase | 0.06 | Archaeplastida | |
| MA_10428603g0020 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_10430145g0030 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_10437227g0010 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_10437227g0030 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_1164682g0010 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_170547g0010 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| MA_203992g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_474372g0010 | No alias | pectate lyase | 0.01 | Archaeplastida | |
| MA_66914g0010 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| MA_91467g0010 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| MA_91467g0020 | No alias | pectate lyase | 0.06 | Archaeplastida | |
| MA_97947g0010 | No alias | pectate lyase | 0.07 | Archaeplastida | |
| Pp3c10_20140V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c1_33130V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c3_20320V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c3_35190V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Smo407495 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| Solyc02g080910.4.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| Solyc02g093580.4.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Solyc03g111690.4.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| Solyc05g055510.3.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| Solyc06g071840.3.1 | No alias | Probable pectate lyase 22 OS=Arabidopsis thaliana... | 0.01 | Archaeplastida | |
| Solyc09g061890.3.1 | No alias | pectate lyase | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | Neighborhood |
| MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Neighborhood |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |